Disqus - Latest Comments for Duncan Hull

Re: The session I regret missing at scifoo

Duncan Hull — Thu, 09 Aug 2007 06:42:37 -0000

Hello, its not possible to attend every session without cloning yourself. This is why we have blogging! Genome Voyeurism...(in case you haven't seen it already)

Re: Collective Intelligence in the life sciences

Duncan Hull — Wed, 24 Oct 2007 09:55:39 -0000

Hi Deepak, I agree whole heartedly with simple APIs. SOAP-and-WSDL seem inappropriate for a lot of bioinformatics. This O'Reilly book on REST is a great howto, been passing it around the lab here, its a good read if you're into that sort of thing. Cheers. Duncan

Re: myExperiment: A social network for workflows

Duncan Hull — Fri, 11 Jan 2008 08:05:10 -0000

Hi Deepak, thanks very much for blogging myExperiment. If any of your readers at bbgm have any thoughts or experiences (good or bad) on myExperiment we'd love to hear from them e.g. via the myExperiment feedback page.

Re: OWL 1.1

Duncan Hull — Wed, 21 Dec 2005 04:05:47 -0000

Hi Bijan, I look forward to using OWL 1.1 when it arrives, the links to Peters overview and syntax are dead, do you know where they moved to? Duncan

Re: Burn the witch!

Duncan Hull — Fri, 01 Aug 2008 18:31:33 -0000

Hi Bijan

I just get

Input file: http://clarkparsia.com/weblog/wp-content/mpwa.owl
Load Error: java.lang.RuntimeException: java.io.FileNotFoundException: The file http://clarkparsia.com/weblog/wp-content/mpwa.owl cannot be parsed at org.mindswap.pellet.jena.ModelReader.readFile(ModelReader.java:133) at org.mindswap.pellet.jena.ModelReader.readSeparate(ModelReader.java:164) at org.mindswap.pellet.jena.ModelReader.read(ModelReader.java:245) at org.mindswap.pellet.jena.ModelReader.read(ModelReader.java:234) at org.mindswap.pellet.Pellet.loadInput(Pellet.java:189) at org.mindswap.pellet.Pellet.run(Pellet.java:504) at org.mindswap.pellet.PelletCGI.main(PelletCGI.java:68) Caused by: java.io.FileNotFoundException: The file http://clarkparsia.com/weblog/wp-content/mpwa.owl cannot be parsed at org.mindswap.pellet.jena.ModelReader.createInputStream(ModelReader.java:206) at org.mindswap.pellet.jena.ModelReader.readFile(ModelReader.java:119) ... 6 more OWL Species:

Re: How realistic is using OWL for semweb data integration?

Duncan Hull — Fri, 11 Apr 2008 08:47:38 -0000

If ATOM were an RDF format, nobody would use it :) and if RDF is the answer, then we're asking the wrong questions...