Duncan Hull
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3 months ago
in Burn the witch! on Thinking Clearly
Hi Bijan
I just get
Input file: http://clarkparsia.com/weblog/wp-content/mpwa.owl
Load Error: java.lang.RuntimeException: java.io.FileNotFoundException: The file http://clarkparsia.com/weblog/wp-content/mpwa.owl cannot be parsed at org.mindswap.pellet.jena.ModelReader.readFile(ModelReader.java:133) at org.mindswap.pellet.jena.ModelReader.readSeparate(ModelReader.java:164) at org.mindswap.pellet.jena.ModelReader.read(ModelReader.java:245) at org.mindswap.pellet.jena.ModelReader.read(ModelReader.java:234) at org.mindswap.pellet.Pellet.loadInput(Pellet.java:189) at org.mindswap.pellet.Pellet.run(Pellet.java:504) at org.mindswap.pellet.PelletCGI.main(PelletCGI.java:68) Caused by: java.io.FileNotFoundException: The file http://clarkparsia.com/weblog/wp-content/mpwa.owl cannot be parsed at org.mindswap.pellet.jena.ModelReader.createInputStream(ModelReader.java:206) at org.mindswap.pellet.jena.ModelReader.readFile(ModelReader.java:119) ... 6 more OWL Species:
I just get
Input file: http://clarkparsia.com/weblog/wp-content/mpwa.owl
Load Error: java.lang.RuntimeException: java.io.FileNotFoundException: The file http://clarkparsia.com/weblog/wp-content/mpwa.owl cannot be parsed at org.mindswap.pellet.jena.ModelReader.readFile(ModelReader.java:133) at org.mindswap.pellet.jena.ModelReader.readSeparate(ModelReader.java:164) at org.mindswap.pellet.jena.ModelReader.read(ModelReader.java:245) at org.mindswap.pellet.jena.ModelReader.read(ModelReader.java:234) at org.mindswap.pellet.Pellet.loadInput(Pellet.java:189) at org.mindswap.pellet.Pellet.run(Pellet.java:504) at org.mindswap.pellet.PelletCGI.main(PelletCGI.java:68) Caused by: java.io.FileNotFoundException: The file http://clarkparsia.com/weblog/wp-content/mpwa.owl cannot be parsed at org.mindswap.pellet.jena.ModelReader.createInputStream(ModelReader.java:206) at org.mindswap.pellet.jena.ModelReader.readFile(ModelReader.java:119) ... 6 more OWL Species:
7 months ago
in How realistic is using OWL for semweb data integration? on Phil Dawes' Stuff
If ATOM were an RDF format, nobody would use it :) and if RDF is the answer, then we're asking the wrong questions...
10 months ago
in myExperiment: A social network for workflows on bbgm - the discussion
Hi Deepak, thanks very much for blogging myExperiment. If any of your readers at bbgm have any thoughts or experiences (good or bad) on myExperiment we'd love to hear from them e.g. via the myExperiment feedback page.
1 year ago
in Collective Intelligence in the life sciences on bbgm - the discussion
Hi Deepak, I agree whole heartedly with simple APIs. SOAP-and-WSDL seem inappropriate for a lot of bioinformatics. This O'Reilly book on REST is a great howto, been passing it around the lab here, its a good read if you're into that sort of thing. Cheers. Duncan
1 year ago
in The session I regret missing at scifoo on bbgm - the discussion
Hello, its not possible to attend every session without cloning yourself. This is why we have blogging! Genome Voyeurism...(in case you haven't seen it already)
2 years ago
in OWL 1.1 on Thinking Clearly
Hi Bijan, I look forward to using OWL 1.1 when it arrives, the links to Peters overview and syntax are dead, do you know where they moved to? Duncan